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E

E_CCC_BICLUSTERING - Static variable in class biggests.gui.PanelBiclustering
e-CCC-Biclustering algorithm name.
endTreeViewApp() - Method in class biggests.gui.PanelAnalyzingMatrixDendrogram
 
equals(Object) - Method in class biggests.clustering.ClusterTreeNode
Overrides Object's equals method.
equals(Object) - Method in class biggests.clustering.ClusterTreeNodeComparator
Indicates whether some other object is "equal to" this Comparator.
EUCLIDEAN_DISTANCE - Static variable in class biggests.clustering.AbstractMetricClustering
Euclidean distance (distance metric).
euclideanDistance(double[][], double[][], int[][], int[][], double[], int, int, boolean) - Static method in class biggests.clustering.AbstractMetricClustering
Calculates the weighted Euclidean distance between two genes/rows or two conditions/columns.
EVEN_ROWS_COLOR - Static variable in class biggests.tables.TableFunctionGroup
Default color to user in even rows (when they are not selected).
EVEN_ROWS_COLOR - Static variable in class biggests.tables.TableFunctionIndividual
Default color for even rows.
exportBiclustersGroupTXTAsDiscreteValuedMatrices(BiclusteringInDiscretizedMatrix, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclustersGroupTXTAsRealValuedMatrices(Biclustering, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclustersGroupTXTAsSubsetOfRowsAndCols(Biclustering, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclustersGroupTXTForRegulatorySnapshots(Biclustering, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclusterTXTAsDiscreteValuedMatrix(CCC_Bicluster, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclusterTXTAsRealValuedMatrix(Bicluster, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclusterTXTAsSubsetOfRowsAndCols(Bicluster, File) - Static method in class biggests.gui.BiggestsIO
 
exportBiclusterTXTForRegulatorySnapshots(Bicluster, File, File) - Static method in class biggests.gui.BiggestsIO
 
exportComponentToImage(Component, String, String) - Static method in class biggests.gui.BiggestsIO
Exports a GUI component to an image file.
exportComponentToImage(Component, int, int, int, int, String, String) - Static method in class biggests.gui.BiggestsIO
Exports a GUI component to an image file.
exportDiscretizedTXT(DiscretizedExpressionMatrix, File) - Static method in class biggests.gui.BiggestsIO
 
exportNodeContentToTextFile(File) - Method in class biggests.tree.DatasetTree
 
exportOriginalOrPreprocessedTXT(IMatrix, File) - Static method in class biggests.gui.BiggestsIO
Writes a chart to an output stream in SVG document format.
exportToImage() - Method in class biggests.tables.TableColors
Exports this table to an image file.
exportToImage() - Method in class biggests.tables.TableSymbols
Exports this table to an image file.
expressionData - Variable in class biggests.clustering.AbstractMetricClustering
Expression data.

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