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E_CCC_BICLUSTERING
- Static variable in class biggests.gui.
PanelBiclustering
e-CCC-Biclustering algorithm name.
endTreeViewApp()
- Method in class biggests.gui.
PanelAnalyzingMatrixDendrogram
equals(Object)
- Method in class biggests.clustering.
ClusterTreeNode
Overrides
Object
's
equals
method.
equals(Object)
- Method in class biggests.clustering.
ClusterTreeNodeComparator
Indicates whether some other object is "equal to" this Comparator.
EUCLIDEAN_DISTANCE
- Static variable in class biggests.clustering.
AbstractMetricClustering
Euclidean distance (distance metric).
euclideanDistance(double[][], double[][], int[][], int[][], double[], int, int, boolean)
- Static method in class biggests.clustering.
AbstractMetricClustering
Calculates the weighted Euclidean distance between two genes/rows or two conditions/columns.
EVEN_ROWS_COLOR
- Static variable in class biggests.tables.
TableFunctionGroup
Default color to user in even rows (when they are not selected).
EVEN_ROWS_COLOR
- Static variable in class biggests.tables.
TableFunctionIndividual
Default color for even rows.
exportBiclustersGroupTXTAsDiscreteValuedMatrices(BiclusteringInDiscretizedMatrix, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclustersGroupTXTAsRealValuedMatrices(Biclustering, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclustersGroupTXTAsSubsetOfRowsAndCols(Biclustering, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclustersGroupTXTForRegulatorySnapshots(Biclustering, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclusterTXTAsDiscreteValuedMatrix(CCC_Bicluster, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclusterTXTAsRealValuedMatrix(Bicluster, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclusterTXTAsSubsetOfRowsAndCols(Bicluster, File)
- Static method in class biggests.gui.
BiggestsIO
exportBiclusterTXTForRegulatorySnapshots(Bicluster, File, File)
- Static method in class biggests.gui.
BiggestsIO
exportComponentToImage(Component, String, String)
- Static method in class biggests.gui.
BiggestsIO
Exports a GUI component to an image file.
exportComponentToImage(Component, int, int, int, int, String, String)
- Static method in class biggests.gui.
BiggestsIO
Exports a GUI component to an image file.
exportDiscretizedTXT(DiscretizedExpressionMatrix, File)
- Static method in class biggests.gui.
BiggestsIO
exportNodeContentToTextFile(File)
- Method in class biggests.tree.
DatasetTree
exportOriginalOrPreprocessedTXT(IMatrix, File)
- Static method in class biggests.gui.
BiggestsIO
Writes a chart to an output stream in SVG document format.
exportToImage()
- Method in class biggests.tables.
TableColors
Exports this table to an image file.
exportToImage()
- Method in class biggests.tables.
TableSymbols
Exports this table to an image file.
expressionData
- Variable in class biggests.clustering.
AbstractMetricClustering
Expression data.
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