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Packages that use NodeInfo | |
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biggests.gui | |
biggests.tree |
Uses of NodeInfo in biggests.gui |
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Methods in biggests.gui that return NodeInfo | |
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NodeInfo |
PanelAnalyzingMatrixTables.getNodeInfo()
Returns the node information object containing the object with the data to display in the table. |
Methods in biggests.gui with parameters of type NodeInfo | |
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void |
PanelAnalyzingMatrixTables.paint(NodeInfo nodeInfo,
javax.swing.tree.TreePath selectionPath)
Creates and displays the tables with data retrieved from the node object associated with the given node info object. |
void |
PanelExpression.paintAllTimePointsChart(NodeInfo nodeInfo,
NodeInfo parentNodeInfo)
Paints an expression chart which data consists of the gene expression values for the genes in a specific nodeInfo matrix object
under all conditions of a specific parentNodeInfo matrix
object. |
void |
PanelExpression.paintBiclusterPatternCharts(NodeInfo nodeInfo)
Paints one bicluster / set of bicluster pattern charts. |
void |
PanelExpression.paintBiclusterTimePointsCharts(NodeInfo nodeInfo)
Paints one or a set of bicluster time points charts. |
Uses of NodeInfo in biggests.tree |
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Methods in biggests.tree that return NodeInfo | |
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NodeInfo |
DatasetTree.findBiclusterNodeByIDinSetOfBiclustersNodes(java.util.Enumeration setOfBiclustersNodes,
int id)
Looks for a NodeInfo object of a bicluster or
post-processed bicluster object with a specific id . |
NodeInfo |
NodeInfo.getParentNodeInfo()
Returns parent node information object. |
Methods in biggests.tree with parameters of type NodeInfo | |
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javax.swing.tree.TreePath |
DatasetTree.addLoadedDataset(NodeInfo originalNodeInfo)
Adds the loaded dataset to the dataset tree and creates all additional nodes for preprocessed, discretized, biclustered and post-processed matrices of the dataset. |
javax.swing.tree.TreePath |
DatasetTree.addLoadedDataset(NodeInfo originalNodeInfo,
boolean setNewPath)
Adds the loaded dataset to the dataset tree and creates all additional nodes for preprocessed, discretized, biclustered and post-processed matrices of the dataset. |
javax.swing.tree.TreePath |
DatasetTree.addNewNode(NodeInfo nodeInfo,
javax.swing.tree.TreePath selectionPath,
boolean reload)
Adds a new node to the datasets tree, associated with a node information object. |
void |
DatasetTree.addNewNode(NodeInfo nodeInfo,
javax.swing.tree.TreePath selectionPath,
boolean setNewPath,
boolean reload)
Adds a new node to the datasets tree, associated with a node information object. |
Constructors in biggests.tree with parameters of type NodeInfo | |
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NodeInfo(smadeira.biclustering.NodeObjectInterface nodeObject,
int nodeObjectType,
javax.swing.tree.TreePath selectionPath,
DatasetTree tree,
NodeInfo parent,
java.util.ArrayList<java.lang.String> infoStrings,
java.util.ArrayList<java.lang.String> infoStyles)
Constructs an object of type NodeInfo (with all the information about
a certain node, including a pointer for the node object itself. |
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NodeInfo(smadeira.biclustering.NodeObjectInterface nodeObject,
int nodeObjectType,
javax.swing.tree.TreePath selectionPath,
DatasetTree tree,
NodeInfo parent,
java.util.ArrayList<java.lang.String> infoStrings,
java.util.ArrayList<java.lang.String> infoStyles,
int index)
Constructs an object of type NodeInfo (with all the information about
a certain node, including a pointer for the node object itself. |
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