Changes and updates in v1.0.1 (previous was v1.0.0) - Changed the way the computation of the number of terms annotating a given gene is performed. In this version the number of annotations of a gene corresponds to the number of most specific GO terms that annotate it, that is, before applying the true path rule. - Improved the method for computing and retrieving the genes annotated with a given GO term. It is now substantially more efficient. - Improved the progress bars, which now show an estimate of the real progress of the computation tasks instead of an indeterminate state. - For tasks whose progress is hard to estimate (rendering tasks and other), the user experience was improved by displaying a colored bar. - Implemented a new color scheme for heatmaps. The user is now able to choose either green vs red or yellow vs blue. - Corrected a minor bug in the visualization of CC-TSB Bicluster heatmaps. - Changed the default options for filtering/sorting biclusters in the post-processing panel. - Implemented an arrow for displaying the mode of sorting in the table headers of the matrices of colors and symbols. - Increased the amount of pixels of the scroll wheel in panels. Notice: The source of the (smadeira.*) package is only partially available. The source code of some classes will only be released after the material has been published. The .class files are however available as a third-party library.